Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 FP325330.2-201ENST00000624219 5630 ntBASIC13.18□□□□□ -0.3
PER3P56645 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 MTHFR-210ENST00000641407 2387 ntBASIC13.17□□□□□ -0.3
PER3P56645 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PER3P56645 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PER3P56645 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PER3P56645 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.17□□□□□ -0.3
PER3P56645 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 AL035414.1-201ENST00000451327 857 ntBASIC13.17□□□□□ -0.3
PER3P56645 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.17□□□□□ -0.3
PER3P56645 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 RBM8B-201ENST00000555532 525 ntBASIC13.17□□□□□ -0.3
PER3P56645 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.17□□□□□ -0.3
PER3P56645 AC026803.1-201ENST00000569130 274 ntBASIC13.17□□□□□ -0.3
PER3P56645 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.17□□□□□ -0.3
PER3P56645 MIR4783-201ENST00000580343 82 ntBASIC13.17□□□□□ -0.3
PER3P56645 MIR4649-201ENST00000582839 64 ntBASIC13.17□□□□□ -0.3
PER3P56645 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.17□□□□□ -0.3
PER3P56645 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.17□□□□□ -0.3
PER3P56645 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PER3P56645 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PER3P56645 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.17□□□□□ -0.3
PER3P56645 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PER3P56645 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 KRT18P9-201ENST00000604826 1300 ntBASIC13.16□□□□□ -0.3
PER3P56645 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.16□□□□□ -0.3
PER3P56645 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PER3P56645 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
PER3P56645 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms