Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC1A1P43005 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A1P43005 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC1A1P43005 DPM3-202ENST00000368399 517 ntBASIC14.74□□□□□ -0.05
SLC1A1P43005 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
SLC1A1P43005 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SLC1A1P43005 AC005034.1-201ENST00000426657 489 ntBASIC14.74□□□□□ -0.05
SLC1A1P43005 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC1A1P43005 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC1A1P43005 RN7SL530P-201ENST00000485097 298 ntBASIC14.74□□□□□ -0.05
SLC1A1P43005 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC1A1P43005 HILS1-202ENST00000545329 423 ntBASIC14.74□□□□□ -0.05
SLC1A1P43005 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC1A1P43005 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC1A1P43005 AL157813.1-201ENST00000612996 587 ntBASIC14.74□□□□□ -0.05
SLC1A1P43005 MIR6805-201ENST00000615055 62 ntBASIC14.74□□□□□ -0.05
SLC1A1P43005 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
SLC1A1P43005 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SLC1A1P43005 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A1P43005 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC1A1P43005 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A1P43005 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC1A1P43005 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 AC010970.1-201ENST00000445125 1848 ntBASIC14.73□□□□□ -0.05
SLC1A1P43005 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC1A1P43005 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC1A1P43005 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC1A1P43005 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC1A1P43005 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 AL356585.2-201ENST00000625078 2396 ntBASIC14.73□□□□□ -0.05
SLC1A1P43005 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC1A1P43005 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC1A1P43005 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC1A1P43005 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 AL591846.1-201ENST00000451736 433 ntBASIC14.73□□□□□ -0.05
SLC1A1P43005 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 RN7SL455P-201ENST00000580629 282 ntBASIC14.73□□□□□ -0.05
SLC1A1P43005 AC017083.2-201ENST00000608069 979 ntBASIC14.73□□□□□ -0.05
SLC1A1P43005 AL022334.2-201ENST00000610000 484 ntBASIC14.73□□□□□ -0.05
SLC1A1P43005 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SLC1A1P43005 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC1A1P43005 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SLC1A1P43005 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC1A1P43005 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SLC1A1P43005 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC1A1P43005 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SLC1A1P43005 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 676.3 ms