Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.58□□□□□ -0.4
CTSSP25774 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.58□□□□□ -0.4
CTSSP25774 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.58□□□□□ -0.4
CTSSP25774 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.58□□□□□ -0.4
CTSSP25774 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CTSSP25774 RN7SL818P-201ENST00000485099 259 ntBASIC12.58□□□□□ -0.4
CTSSP25774 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CTSSP25774 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CTSSP25774 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CTSSP25774 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 RN7SL725P-201ENST00000606439 259 ntBASIC12.58□□□□□ -0.4
CTSSP25774 MIR6858-201ENST00000620733 67 ntBASIC12.58□□□□□ -0.4
CTSSP25774 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.58□□□□□ -0.4
CTSSP25774 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
CTSSP25774 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.58□□□□□ -0.4
CTSSP25774 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSSP25774 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
CTSSP25774 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSSP25774 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSSP25774 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSSP25774 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSSP25774 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CTSSP25774 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.57□□□□□ -0.4
CTSSP25774 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 AK2P2-201ENST00000439142 405 ntBASIC12.57□□□□□ -0.4
CTSSP25774 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.57□□□□□ -0.4
CTSSP25774 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSSP25774 CHCHD2P2-201ENST00000503744 321 ntBASIC12.57□□□□□ -0.4
CTSSP25774 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 RNA5SP417-201ENST00000516459 108 ntBASIC12.57□□□□□ -0.4
CTSSP25774 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.57□□□□□ -0.4
CTSSP25774 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSSP25774 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSSP25774 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 AC073911.3-201ENST00000624401 631 ntBASIC12.57□□□□□ -0.4
CTSSP25774 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSSP25774 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 AC007952.5-201ENST00000572818 1486 ntBASIC12.57□□□□□ -0.4
CTSSP25774 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSSP25774 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CTSSP25774 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSSP25774 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 LINC00115-201ENST00000473798 1317 ntBASIC12.57□□□□□ -0.4
CTSSP25774 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CTSSP25774 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSSP25774 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CTSSP25774 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CTSSP25774 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSSP25774 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.56□□□□□ -0.4
CTSSP25774 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSSP25774 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.56□□□□□ -0.4
CTSSP25774 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.56□□□□□ -0.4
CTSSP25774 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CTSSP25774 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms