Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AL591122.2-201ENST00000624125 1853 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CTLA4P16410 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.51□□□□□ -0.41
CTLA4P16410 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 SNORA50C-201ENST00000408535 133 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 RPS9P1-201ENST00000419943 583 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 MARK2P5-201ENST00000507649 634 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 AC044849.1-201ENST00000519737 1188 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.51□□□□□ -0.41
CTLA4P16410 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.51□□□□□ -0.41
CTLA4P16410 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.51□□□□□ -0.41
CTLA4P16410 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 SNORA50.1-201ENST00000628590 135 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.51□□□□□ -0.41
CTLA4P16410 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CTLA4P16410 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.51□□□□□ -0.41
CTLA4P16410 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.51□□□□□ -0.41
CTLA4P16410 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 AC027612.1-201ENST00000445234 2395 ntBASIC12.5□□□□□ -0.41
CTLA4P16410 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CTLA4P16410 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
CTLA4P16410 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 RN7SL530P-201ENST00000485097 298 ntBASIC12.5□□□□□ -0.41
CTLA4P16410 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.5□□□□□ -0.41
CTLA4P16410 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 MIR3188-201ENST00000583494 85 ntBASIC12.5□□□□□ -0.41
CTLA4P16410 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.5□□□□□ -0.41
CTLA4P16410 AC239800.4-201ENST00000603712 296 ntBASIC12.5□□□□□ -0.41
CTLA4P16410 AL008638.5-201ENST00000623814 1298 ntBASIC12.5□□□□□ -0.41
CTLA4P16410 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.5□□□□□ -0.41
CTLA4P16410 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 AC093462.1-201ENST00000621167 1683 ntBASIC12.5□□□□□ -0.41
CTLA4P16410 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 AC020917.4-201ENST00000623994 1999 ntBASIC12.5□□□□□ -0.41
CTLA4P16410 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.5□□□□□ -0.41
CTLA4P16410 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTLA4P16410 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms