Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 KRT8P1-201ENST00000557533 1207 ntBASIC12.31□□□□□ -0.44
CCL2P13500 AL161670.2-201ENST00000557650 1227 ntBASIC12.31□□□□□ -0.44
CCL2P13500 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL2P13500 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL2P13500 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 AL021578.1-201ENST00000613646 709 ntBASIC12.31□□□□□ -0.44
CCL2P13500 LINC01783-202ENST00000614408 828 ntBASIC12.31□□□□□ -0.44
CCL2P13500 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL2P13500 BX284668.2-205ENST00000619677 828 ntBASIC12.31□□□□□ -0.44
CCL2P13500 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CCL2P13500 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL2P13500 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCL2P13500 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL2P13500 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 OR2K2-202ENST00000374428 1038 ntBASIC12.3□□□□□ -0.44
CCL2P13500 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 BANF1P3-201ENST00000412556 261 ntBASIC12.3□□□□□ -0.44
CCL2P13500 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 AC006335.1-201ENST00000445200 547 ntBASIC12.3□□□□□ -0.44
CCL2P13500 AL133466.1-201ENST00000447582 150 ntBASIC12.3□□□□□ -0.44
CCL2P13500 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 AC008723.1-201ENST00000506922 207 ntBASIC12.3□□□□□ -0.44
CCL2P13500 AC116345.2-201ENST00000512837 523 ntBASIC12.3□□□□□ -0.44
CCL2P13500 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL2P13500 RN7SL574P-201ENST00000581512 297 ntBASIC12.3□□□□□ -0.44
CCL2P13500 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 AF254983.2-201ENST00000612331 135 ntBASIC12.3□□□□□ -0.44
CCL2P13500 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 AC007718.1-201ENST00000621078 280 ntBASIC12.3□□□□□ -0.44
CCL2P13500 CU633904.3-201ENST00000624042 1029 ntBASIC12.3□□□□□ -0.44
CCL2P13500 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCL2P13500 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CCL2P13500 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 AC138969.2-201ENST00000532739 9932 ntBASIC12.3□□□□□ -0.44
CCL2P13500 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 AC005562.1-201ENST00000583030 3219 ntBASIC12.3□□□□□ -0.44
CCL2P13500 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL2P13500 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms