Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.32■□□□□ 0.04
VTNP04004 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.32■□□□□ 0.04
VTNP04004 KRT18P62-201ENST00000446618 1287 ntBASIC15.32■□□□□ 0.04
VTNP04004 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 C2orf69P1-201ENST00000563532 1093 ntBASIC15.32■□□□□ 0.04
VTNP04004 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.32■□□□□ 0.04
VTNP04004 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 RN7SL556P-201ENST00000582856 298 ntBASIC15.32■□□□□ 0.04
VTNP04004 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.32■□□□□ 0.04
VTNP04004 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.32■□□□□ 0.04
VTNP04004 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.32■□□□□ 0.04
VTNP04004 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VTNP04004 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
VTNP04004 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.31■□□□□ 0.04
VTNP04004 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.31■□□□□ 0.04
VTNP04004 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 AC073210.1-201ENST00000414799 232 ntBASIC15.31■□□□□ 0.04
VTNP04004 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.31■□□□□ 0.04
VTNP04004 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.31■□□□□ 0.04
VTNP04004 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.31■□□□□ 0.04
VTNP04004 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.31■□□□□ 0.04
VTNP04004 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.31■□□□□ 0.04
VTNP04004 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.31■□□□□ 0.04
VTNP04004 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.31■□□□□ 0.04
VTNP04004 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VTNP04004 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 AC093462.1-201ENST00000621167 1683 ntBASIC15.31■□□□□ 0.04
VTNP04004 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.31■□□□□ 0.04
VTNP04004 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.31■□□□□ 0.04
VTNP04004 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.31■□□□□ 0.04
VTNP04004 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VTNP04004 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VTNP04004 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 AL365181.3-201ENST00000605886 3222 ntBASIC15.3■□□□□ 0.04
VTNP04004 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VTNP04004 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms