Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.61□□□□□ -0.39
APOA1P02647 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.61□□□□□ -0.39
APOA1P02647 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.61□□□□□ -0.39
APOA1P02647 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.61□□□□□ -0.39
APOA1P02647 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.61□□□□□ -0.39
APOA1P02647 AC092337.1-201ENST00000568699 1129 ntBASIC12.61□□□□□ -0.39
APOA1P02647 AC138761.1-201ENST00000584393 385 ntBASIC12.61□□□□□ -0.39
APOA1P02647 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.61□□□□□ -0.39
APOA1P02647 BX539320.1-201ENST00000623759 877 ntBASIC12.61□□□□□ -0.39
APOA1P02647 AL513210.1-201ENST00000629608 234 ntBASIC12.61□□□□□ -0.39
APOA1P02647 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC12.61□□□□□ -0.39
APOA1P02647 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOA1P02647 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.61□□□□□ -0.39
APOA1P02647 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 AL138725.1-201ENST00000407347 1314 ntBASIC12.61□□□□□ -0.39
APOA1P02647 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.6□□□□□ -0.39
APOA1P02647 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.6□□□□□ -0.39
APOA1P02647 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
APOA1P02647 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.6□□□□□ -0.39
APOA1P02647 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.6□□□□□ -0.39
APOA1P02647 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.6□□□□□ -0.39
APOA1P02647 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.6□□□□□ -0.39
APOA1P02647 AC093813.1-201ENST00000605066 256 ntBASIC12.6□□□□□ -0.39
APOA1P02647 TEX28P1-201ENST00000613479 1221 ntBASIC12.6□□□□□ -0.39
APOA1P02647 TEX28P2-201ENST00000617764 1221 ntBASIC12.6□□□□□ -0.39
APOA1P02647 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
APOA1P02647 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APOA1P02647 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOA1P02647 AL357140.3-201ENST00000639753 1983 ntBASIC12.6□□□□□ -0.39
APOA1P02647 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOA1P02647 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC12.59□□□□□ -0.39
APOA1P02647 ELL2P1-201ENST00000413990 1906 ntBASIC12.59□□□□□ -0.39
APOA1P02647 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOA1P02647 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms