Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.33□□□□□ -0.6
UPK2O00526 SNX29P1-201ENST00000548357 1007 ntBASIC11.33□□□□□ -0.6
UPK2O00526 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.33□□□□□ -0.6
UPK2O00526 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
UPK2O00526 AC012645.4-201ENST00000610691 1061 ntBASIC11.33□□□□□ -0.6
UPK2O00526 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
UPK2O00526 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
UPK2O00526 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
UPK2O00526 CICP20-201ENST00000443330 2801 ntBASIC11.33□□□□□ -0.6
UPK2O00526 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
UPK2O00526 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
UPK2O00526 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.33□□□□□ -0.6
UPK2O00526 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
UPK2O00526 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 COL6A4P2-202ENST00000504443 2753 ntBASIC11.33□□□□□ -0.6
UPK2O00526 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK2O00526 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 AC019294.4-201ENST00000561777 2905 ntBASIC11.32□□□□□ -0.6
UPK2O00526 FP325330.2-201ENST00000624219 5630 ntBASIC11.32□□□□□ -0.6
UPK2O00526 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
UPK2O00526 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.32□□□□□ -0.6
UPK2O00526 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.32□□□□□ -0.6
UPK2O00526 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.32□□□□□ -0.6
UPK2O00526 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 AC011742.3-201ENST00000439053 820 ntBASIC11.32□□□□□ -0.6
UPK2O00526 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 MTX1P1-201ENST00000440904 838 ntBASIC11.32□□□□□ -0.6
UPK2O00526 COX20P2-201ENST00000452636 358 ntBASIC11.32□□□□□ -0.6
UPK2O00526 EIF4HP1-201ENST00000453115 687 ntBASIC11.32□□□□□ -0.6
UPK2O00526 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
UPK2O00526 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.32□□□□□ -0.6
UPK2O00526 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.32□□□□□ -0.6
UPK2O00526 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
UPK2O00526 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 AC005730.2-201ENST00000564549 1184 ntBASIC11.32□□□□□ -0.6
UPK2O00526 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.32□□□□□ -0.6
UPK2O00526 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
UPK2O00526 MIR6775-201ENST00000617557 69 ntBASIC11.32□□□□□ -0.6
UPK2O00526 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.32□□□□□ -0.6
UPK2O00526 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK2O00526 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UPK2O00526 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK2O00526 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms