Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 ALG1L7P-201ENST00000502317 768 ntBASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 AL359219.1-201ENST00000556311 934 ntBASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 KRT8P42-201ENST00000405771 1399 ntBASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 MARK2P9-201ENST00000430958 1727 ntBASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.96■□□□□ 0.14
SYNPO2Q9UMS6 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.96■□□□□ 0.14
SYNPO2Q9UMS6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPO2Q9UMS6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SYNPO2Q9UMS6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SYNPO2Q9UMS6 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.96■□□□□ 0.14
SYNPO2Q9UMS6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 OR51A9P-201ENST00000422578 911 ntBASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AL022344.2-201ENST00000568976 968 ntBASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AC010632.2-201ENST00000588369 1224 ntBASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AC137723.2-201ENST00000623540 398 ntBASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AC007326.2-201ENST00000624224 7579 ntBASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SYNPO2Q9UMS6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 TSPY26P-202ENST00000565928 3884 ntBASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 AC015818.1-201ENST00000451011 244 ntBASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 RN7SL351P-201ENST00000469306 248 ntBASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 AC104212.2-201ENST00000478813 628 ntBASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 AC005274.1-201ENST00000623460 802 ntBASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 AC026336.4-201ENST00000624565 1050 ntBASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 FKBP4P8-201ENST00000610931 1369 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms