Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX1-2Q9UD57 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX1-2Q9UD57 PISD-203ENST00000397500 2194 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX1-2Q9UD57 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX1-2Q9UD57 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX1-2Q9UD57 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX1-2Q9UD57 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 KRT18P13-201ENST00000400056 1290 ntBASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 TUBB2BP1-201ENST00000404155 871 ntBASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AC093520.2-201ENST00000561830 333 ntBASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AC092337.1-201ENST00000568699 1129 ntBASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 TEX28P1-201ENST00000613479 1221 ntBASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 TEX28P2-201ENST00000617764 1221 ntBASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX1-2Q9UD57 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 AC008040.5-201ENST00000599781 1781 ntBASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PPP1R26P1-201ENST00000474415 3613 ntBASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 AL162615.1-201ENST00000429893 1653 ntBASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 AC022145.2-201ENST00000598203 171 ntBASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NKX1-2Q9UD57 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms