Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 AC103592.1-201ENST00000394513 664 ntBASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 HMGA1P1-201ENST00000415560 1062 ntBASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 AC005077.2-201ENST00000449786 690 ntBASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 RN7SL11P-201ENST00000471305 293 ntBASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PARPBPQ9NWS1 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PARPBPQ9NWS1 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 CYP46A4P-201ENST00000414953 267 ntBASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 AL133466.1-201ENST00000447582 150 ntBASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 AL353637.1-201ENST00000451571 732 ntBASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 HIST2H2BC-201ENST00000498492 580 ntBASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 RPL13AP3-202ENST00000494676 1473 ntBASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PARPBPQ9NWS1 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms