Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 AC092612.1-201ENST00000514501 998 ntBASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 RN7SL605P-201ENST00000577229 281 ntBASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 MIR600HG-201ENST00000449175 5984 ntBASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRMT13Q9NUP7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AC092810.2-201ENST00000431570 362 ntBASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AC027612.2-202ENST00000445955 1199 ntBASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AC091304.3-201ENST00000566500 716 ntBASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 MIR4326-201ENST00000582203 59 ntBASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 CSTP2-201ENST00000610599 398 ntBASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AC007326.2-201ENST00000624224 7579 ntBASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRMT13Q9NUP7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms