Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 AP000356.3-201ENST00000382243 753 ntBASIC20.27■□□□□ 0.84
SIN3AQ96ST3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 AL512306.1-201ENST00000432698 848 ntBASIC20.27■□□□□ 0.84
SIN3AQ96ST3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 SIGLEC22P-201ENST00000599104 714 ntBASIC20.27■□□□□ 0.84
SIN3AQ96ST3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 AC005041.3-201ENST00000606287 649 ntBASIC20.27■□□□□ 0.84
SIN3AQ96ST3 AC103810.10-201ENST00000606504 343 ntBASIC20.27■□□□□ 0.84
SIN3AQ96ST3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.27■□□□□ 0.84
SIN3AQ96ST3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIN3AQ96ST3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIN3AQ96ST3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SIN3AQ96ST3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIN3AQ96ST3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIN3AQ96ST3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIN3AQ96ST3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SIN3AQ96ST3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AC026316.1-201ENST00000398900 414 ntBASIC20.26■□□□□ 0.83
SIN3AQ96ST3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AL592076.1-201ENST00000424448 303 ntBASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 KRT18P8-201ENST00000581937 1246 ntBASIC20.26■□□□□ 0.83
SIN3AQ96ST3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 MIR6842-201ENST00000612539 65 ntBASIC20.26■□□□□ 0.83
SIN3AQ96ST3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.26■□□□□ 0.83
SIN3AQ96ST3 TEKT4P2-202ENST00000559466 1312 ntBASIC20.26■□□□□ 0.83
SIN3AQ96ST3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 EGLN3-205ENST00000547327 2849 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms