Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 PSME2P2-201ENST00000453033 700 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 ALG1L15P-201ENST00000482834 794 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 RPL29P2-202ENST00000498671 657 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 IGHVII-74-1-201ENST00000517572 241 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 MIR5091-201ENST00000578707 93 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 AC005746.3-201ENST00000614751 393 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 AC020922.4-201ENST00000621389 339 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 AC097359.2-201ENST00000604992 2389 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 AC024075.2-201ENST00000598112 1473 ntBASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.86■□□□□ 0.29
CRAMP1Q96RY5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 TREX1-203ENST00000456089 629 ntTSL 3 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 RN7SL578P-201ENST00000477781 283 ntBASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 MTHFD2P7-201ENST00000483867 983 ntBASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 RN7SL523P-201ENST00000484401 298 ntBASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 STK16-202ENST00000409260 1493 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC16.85■□□□□ 0.29
CRAMP1Q96RY5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 AC245140.2-201ENST00000624054 1939 ntBASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRAMP1Q96RY5 AL390755.1-201ENST00000623716 2027 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms