Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H3F3CQ6NXT2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AC099521.3-201ENST00000624251 2938 ntBASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 Z69890.1-201ENST00000382990 339 ntBASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 NUDT4P2-201ENST00000578341 546 ntBASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 HSPA8P5-201ENST00000456928 2069 ntBASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3CQ6NXT2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 AC020910.6-201ENST00000623084 1459 ntBASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3CQ6NXT2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms