Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 MIR4746-201ENST00000579802 71 ntBASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 MEP1AP1-201ENST00000636082 1097 ntBASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 TUBB8P4-201ENST00000511806 1324 ntBASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AC015818.1-201ENST00000451011 244 ntBASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 VDAC1P11-201ENST00000458323 852 ntBASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 RPSAP70-201ENST00000504462 864 ntBASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AC112250.1-201ENST00000504640 745 ntBASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AC006116.2-201ENST00000589958 988 ntBASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 AL139424.3-202ENST00000641619 917 ntBASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD4Q5XG99 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
LYSMD4Q5XG99 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 CTSL-202ENST00000342020 933 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AL157823.1-201ENST00000403727 628 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 ZNF877P-201ENST00000437614 612 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AL136084.1-201ENST00000449172 318 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 RPL29P2-201ENST00000488409 460 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AC147876.1-201ENST00000504408 322 ntBASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD4Q5XG99 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms