Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 ELK2AP-201ENST00000392510 1007 ntBASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 AL161670.2-201ENST00000557650 1227 ntBASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 PHBP15-201ENST00000574228 665 ntBASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 AF254983.2-201ENST00000612331 135 ntBASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 AL139158.3-201ENST00000641212 1562 ntBASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NIPAL4Q0D2K0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 POU5F1P2-201ENST00000521750 823 ntBASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 RN7SL574P-201ENST00000581512 297 ntBASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 AL021707.6-201ENST00000609212 491 ntBASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 AP001505.2-201ENST00000616815 443 ntBASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 CR392039.2-201ENST00000623182 509 ntBASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 AL139099.5-201ENST00000635274 300 ntBASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 SALL4P6-201ENST00000429385 1691 ntBASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms