Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.66□□□□□ -0.38
VBP1P61758 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
VBP1P61758 KLF2P2-201ENST00000416807 1039 ntBASIC12.66□□□□□ -0.38
VBP1P61758 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.66□□□□□ -0.38
VBP1P61758 PUDPP3-201ENST00000445368 636 ntBASIC12.66□□□□□ -0.38
VBP1P61758 AC114812.1-204ENST00000449669 728 ntBASIC12.66□□□□□ -0.38
VBP1P61758 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.66□□□□□ -0.38
VBP1P61758 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
VBP1P61758 FAM86LP-201ENST00000478302 853 ntBASIC12.66□□□□□ -0.38
VBP1P61758 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.66□□□□□ -0.38
VBP1P61758 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.66□□□□□ -0.38
VBP1P61758 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
VBP1P61758 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.65□□□□□ -0.38
VBP1P61758 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VBP1P61758 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VBP1P61758 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.65□□□□□ -0.38
VBP1P61758 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VBP1P61758 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 AC009093.10-201ENST00000641956 1442 ntBASIC12.65□□□□□ -0.38
VBP1P61758 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.65□□□□□ -0.38
VBP1P61758 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VBP1P61758 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 MEIS3P1-201ENST00000495167 958 ntBASIC12.65□□□□□ -0.38
VBP1P61758 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.65□□□□□ -0.38
VBP1P61758 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.65□□□□□ -0.38
VBP1P61758 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.65□□□□□ -0.38
VBP1P61758 AC092865.5-201ENST00000545435 363 ntBASIC12.65□□□□□ -0.38
VBP1P61758 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VBP1P61758 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.65□□□□□ -0.38
VBP1P61758 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VBP1P61758 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
VBP1P61758 C20orf181-201ENST00000623918 480 ntBASIC12.65□□□□□ -0.38
VBP1P61758 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms