Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
RIPPLY3P57055 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RIPPLY3P57055 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RIPPLY3P57055 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
RIPPLY3P57055 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 DUX4L50-201ENST00000455245 715 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 AP000533.1-201ENST00000456143 1177 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 HNRNPA1P5-201ENST00000558213 966 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 AC079414.2-201ENST00000567157 1104 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 AC132812.1-201ENST00000583145 892 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 AC016582.2-202ENST00000587765 1094 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 SIGLEC22P-201ENST00000599104 714 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 AC010335.3-201ENST00000623767 531 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 AL158070.2-201ENST00000623713 1621 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 AP001282.1-201ENST00000531301 1499 ntBASIC11.81□□□□□ -0.52
RIPPLY3P57055 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RIPPLY3P57055 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
RIPPLY3P57055 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 WASH3P-207ENST00000560956 1394 ntBASIC11.8□□□□□ -0.52
RIPPLY3P57055 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RIPPLY3P57055 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RIPPLY3P57055 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms