Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KNTC1P50748 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.36□□□□□ -0.27
KNTC1P50748 MIR2278-201ENST00000516344 96 ntBASIC13.36□□□□□ -0.27
KNTC1P50748 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.36□□□□□ -0.27
KNTC1P50748 AC078814.4-201ENST00000546650 327 ntBASIC13.36□□□□□ -0.27
KNTC1P50748 AC004801.1-201ENST00000549557 360 ntBASIC13.36□□□□□ -0.27
KNTC1P50748 FBXO36P1-201ENST00000579006 471 ntBASIC13.36□□□□□ -0.27
KNTC1P50748 MIR4265-201ENST00000582152 99 ntBASIC13.36□□□□□ -0.27
KNTC1P50748 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC13.36□□□□□ -0.27
KNTC1P50748 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 KRT8P43-201ENST00000406052 1458 ntBASIC13.35□□□□□ -0.27
KNTC1P50748 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
KNTC1P50748 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 SLC25A15P3-201ENST00000505530 290 ntBASIC13.35□□□□□ -0.27
KNTC1P50748 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 AC087203.1-201ENST00000532111 1181 ntBASIC13.35□□□□□ -0.27
KNTC1P50748 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.35□□□□□ -0.27
KNTC1P50748 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 AC103563.1-201ENST00000429316 123 ntBASIC13.35□□□□□ -0.27
KNTC1P50748 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 RN7SL351P-201ENST00000469306 248 ntBASIC13.35□□□□□ -0.27
KNTC1P50748 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.35□□□□□ -0.27
KNTC1P50748 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 AC092115.1-201ENST00000566277 1402 ntBASIC13.35□□□□□ -0.27
KNTC1P50748 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
KNTC1P50748 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.35□□□□□ -0.27
KNTC1P50748 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.35□□□□□ -0.27
KNTC1P50748 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KNTC1P50748 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KNTC1P50748 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KNTC1P50748 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.34□□□□□ -0.27
KNTC1P50748 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.34□□□□□ -0.27
KNTC1P50748 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
KNTC1P50748 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KNTC1P50748 AC013268.4-201ENST00000637413 2228 ntBASIC13.34□□□□□ -0.27
KNTC1P50748 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KNTC1P50748 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms