Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CPT1AP50416 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPT1AP50416 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.43■□□□□ 0.06
CPT1AP50416 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CPT1AP50416 AC092570.1-201ENST00000414446 469 ntBASIC15.43■□□□□ 0.06
CPT1AP50416 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.43■□□□□ 0.06
CPT1AP50416 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.43■□□□□ 0.06
CPT1AP50416 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.43■□□□□ 0.06
CPT1AP50416 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.43■□□□□ 0.06
CPT1AP50416 FAM187B2P-201ENST00000577135 713 ntBASIC15.43■□□□□ 0.06
CPT1AP50416 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.43■□□□□ 0.06
CPT1AP50416 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.43■□□□□ 0.06
CPT1AP50416 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.43■□□□□ 0.06
CPT1AP50416 AC139713.2-207ENST00000641556 1292 ntBASIC15.43■□□□□ 0.06
CPT1AP50416 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.43■□□□□ 0.06
CPT1AP50416 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 AC015656.1-201ENST00000624209 3578 ntBASIC15.43■□□□□ 0.06
CPT1AP50416 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPT1AP50416 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.43■□□□□ 0.06
CPT1AP50416 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CPT1AP50416 AC008620.2-201ENST00000510294 1569 ntBASIC15.42■□□□□ 0.06
CPT1AP50416 NRADDP-202ENST00000641269 1585 ntBASIC15.42■□□□□ 0.06
CPT1AP50416 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 AC106827.1-201ENST00000366454 431 ntBASIC15.42■□□□□ 0.06
CPT1AP50416 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.42■□□□□ 0.06
CPT1AP50416 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.42■□□□□ 0.06
CPT1AP50416 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.42■□□□□ 0.06
CPT1AP50416 AC104212.2-201ENST00000478813 628 ntBASIC15.42■□□□□ 0.06
CPT1AP50416 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.42■□□□□ 0.06
CPT1AP50416 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.42■□□□□ 0.06
CPT1AP50416 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.42■□□□□ 0.06
CPT1AP50416 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CPT1AP50416 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.42■□□□□ 0.06
CPT1AP50416 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 AC113385.2-201ENST00000614465 762 ntBASIC15.42■□□□□ 0.06
CPT1AP50416 BAP1-211ENST00000615113 489 ntBASIC15.42■□□□□ 0.06
CPT1AP50416 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CPT1AP50416 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 AL136379.1-201ENST00000623471 2642 ntBASIC15.42■□□□□ 0.06
CPT1AP50416 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
CPT1AP50416 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.42■□□□□ 0.06
CPT1AP50416 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.42■□□□□ 0.06
CPT1AP50416 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CPT1AP50416 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CPT1AP50416 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPT1AP50416 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.41■□□□□ 0.06
CPT1AP50416 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CPT1AP50416 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.41■□□□□ 0.06
CPT1AP50416 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.41■□□□□ 0.06
CPT1AP50416 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms