Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATP2B1P20020 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP2B1P20020 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2B1P20020 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ATP2B1P20020 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ATP2B1P20020 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP2B1P20020 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 RN7SL277P-201ENST00000481521 288 ntBASIC16.32■□□□□ 0.2
ATP2B1P20020 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ATP2B1P20020 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.32■□□□□ 0.2
ATP2B1P20020 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATP2B1P20020 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2B1P20020 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2B1P20020 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ATP2B1P20020 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ATP2B1P20020 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.31■□□□□ 0.2
ATP2B1P20020 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 AC006033.1-201ENST00000440505 426 ntBASIC16.31■□□□□ 0.2
ATP2B1P20020 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 RCC2P8-201ENST00000502779 1035 ntBASIC16.31■□□□□ 0.2
ATP2B1P20020 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2B1P20020 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2B1P20020 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2B1P20020 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2B1P20020 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2B1P20020 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP2B1P20020 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2B1P20020 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP2B1P20020 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms