Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RN7SL455P-201ENST00000580629 282 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 AC020914.3-201ENST00000594712 304 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.35□□□□□ -0.11
NFKB1P19838 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 MEG3_2.1-201ENST00000611456 105 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 Z99916.3-201ENST00000623422 1080 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 TUBBP5-203ENST00000508529 1334 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 AC087386.2-201ENST00000623212 4637 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.34□□□□□ -0.11
NFKB1P19838 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NFKB1P19838 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.34□□□□□ -0.11
NFKB1P19838 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 AC007274.1-201ENST00000439805 662 ntBASIC14.34□□□□□ -0.11
NFKB1P19838 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.34□□□□□ -0.11
NFKB1P19838 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 ALG1L13P-202ENST00000519320 584 ntBASIC14.34□□□□□ -0.11
NFKB1P19838 AC090857.1-201ENST00000527400 390 ntBASIC14.34□□□□□ -0.11
NFKB1P19838 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 KRT8P1-201ENST00000557533 1207 ntBASIC14.34□□□□□ -0.11
NFKB1P19838 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.34□□□□□ -0.11
NFKB1P19838 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.34□□□□□ -0.11
NFKB1P19838 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NFKB1P19838 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NFKB1P19838 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 AC092053.3-201ENST00000641308 4975 ntBASIC14.34□□□□□ -0.11
NFKB1P19838 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NFKB1P19838 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NFKB1P19838 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
NFKB1P19838 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NFKB1P19838 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NFKB1P19838 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.33□□□□□ -0.11
NFKB1P19838 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NFKB1P19838 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.33□□□□□ -0.11
NFKB1P19838 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NFKB1P19838 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NFKB1P19838 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms