Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
TRGV3P03979 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 AC239868.1-201ENST00000369385 493 ntBASIC11.16□□□□□ -0.62
TRGV3P03979 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 HMGA1P1-201ENST00000415560 1062 ntBASIC11.16□□□□□ -0.62
TRGV3P03979 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV3P03979 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV3P03979 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV3P03979 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
TRGV3P03979 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.16□□□□□ -0.62
TRGV3P03979 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC11.16□□□□□ -0.62
TRGV3P03979 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.16□□□□□ -0.62
TRGV3P03979 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 MST1P2-201ENST00000457982 2291 ntBASIC11.16□□□□□ -0.62
TRGV3P03979 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV3P03979 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
TRGV3P03979 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV3P03979 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
TRGV3P03979 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
TRGV3P03979 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV3P03979 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 LINC00115-201ENST00000473798 1317 ntBASIC11.15□□□□□ -0.62
TRGV3P03979 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.15□□□□□ -0.62
TRGV3P03979 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
TRGV3P03979 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 AC007952.5-201ENST00000572818 1486 ntBASIC11.15□□□□□ -0.62
TRGV3P03979 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 CICP17-201ENST00000418553 2377 ntBASIC11.15□□□□□ -0.62
TRGV3P03979 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 SDCCAG3P2-201ENST00000326105 1023 ntBASIC11.15□□□□□ -0.62
TRGV3P03979 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV3P03979 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 CALR4P-201ENST00000431943 946 ntBASIC11.15□□□□□ -0.62
TRGV3P03979 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.15□□□□□ -0.62
TRGV3P03979 HIST2H2BC-201ENST00000498492 580 ntBASIC11.15□□□□□ -0.62
TRGV3P03979 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.15□□□□□ -0.62
TRGV3P03979 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.15□□□□□ -0.62
TRGV3P03979 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV3P03979 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms