Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 TSPY25P-201ENST00000429463 745 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AC092580.1-201ENST00000433998 658 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 EIF4HP1-201ENST00000453115 687 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 KRT8P13-201ENST00000463294 1010 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AL512310.5-201ENST00000551999 515 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 MIR3188-201ENST00000583494 85 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AL451050.2-201ENST00000606967 682 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AC026740.1-201ENST00000607068 791 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AC100757.4-201ENST00000626934 759 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AC244452.3-201ENST00000636814 210 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 AP002353.1-201ENST00000528257 1599 ntBASIC11.4□□□□□ -0.58
HLA-DRB1P01911 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB1P01911 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.4□□□□□ -0.59
HLA-DRB1P01911 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB1P01911 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.4□□□□□ -0.59
HLA-DRB1P01911 AC090643.2-201ENST00000623442 2029 ntBASIC11.4□□□□□ -0.59
HLA-DRB1P01911 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
HLA-DRB1P01911 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
HLA-DRB1P01911 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.4□□□□□ -0.59
HLA-DRB1P01911 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 RN7SKP214-201ENST00000364208 315 ntBASIC11.39□□□□□ -0.59
HLA-DRB1P01911 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 KRT18P15-201ENST00000458108 1291 ntBASIC11.39□□□□□ -0.59
HLA-DRB1P01911 ARTN-209ENST00000479128 471 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 SCARNA20.5-201ENST00000516991 142 ntBASIC11.39□□□□□ -0.59
HLA-DRB1P01911 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB1P01911 AL645939.5-201ENST00000606834 243 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms