Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
GPC4O75487 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.24□□□□□ -0.13
GPC4O75487 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 AC099521.3-201ENST00000624251 2938 ntBASIC14.24□□□□□ -0.13
GPC4O75487 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 FAM90A7P-201ENST00000382628 1395 ntBASIC14.23□□□□□ -0.13
GPC4O75487 FAM90A23P-201ENST00000400136 1395 ntBASIC14.23□□□□□ -0.13
GPC4O75487 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 AGAP10P-201ENST00000454844 2418 ntBASIC14.23□□□□□ -0.13
GPC4O75487 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GPC4O75487 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GPC4O75487 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.23□□□□□ -0.13
GPC4O75487 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.23□□□□□ -0.13
GPC4O75487 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.23□□□□□ -0.13
GPC4O75487 BRWD1P1-201ENST00000401091 371 ntBASIC14.23□□□□□ -0.13
GPC4O75487 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.23□□□□□ -0.13
GPC4O75487 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.23□□□□□ -0.13
GPC4O75487 SCARNA21-201ENST00000517026 139 ntBASIC14.23□□□□□ -0.13
GPC4O75487 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.23□□□□□ -0.13
GPC4O75487 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.23□□□□□ -0.13
GPC4O75487 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 AC068587.8-201ENST00000641239 219 ntBASIC14.23□□□□□ -0.13
GPC4O75487 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GPC4O75487 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.23□□□□□ -0.13
GPC4O75487 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GPC4O75487 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
GPC4O75487 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GPC4O75487 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GPC4O75487 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GPC4O75487 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GPC4O75487 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GPC4O75487 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 DPM3-202ENST00000368399 517 ntBASIC14.22□□□□□ -0.13
GPC4O75487 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GPC4O75487 KRT18P36-201ENST00000411618 1276 ntBASIC14.22□□□□□ -0.13
GPC4O75487 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.22□□□□□ -0.13
GPC4O75487 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GPC4O75487 PFN1P12-201ENST00000455938 534 ntBASIC14.22□□□□□ -0.13
GPC4O75487 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.22□□□□□ -0.13
GPC4O75487 AC126915.1-201ENST00000522847 1038 ntBASIC14.22□□□□□ -0.13
GPC4O75487 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.22□□□□□ -0.13
GPC4O75487 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 AL008638.5-201ENST00000623814 1298 ntBASIC14.22□□□□□ -0.13
GPC4O75487 AC004923.1-202ENST00000642106 209 ntBASIC14.22□□□□□ -0.13
GPC4O75487 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.22□□□□□ -0.13
GPC4O75487 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.22□□□□□ -0.13
GPC4O75487 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
GPC4O75487 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GPC4O75487 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms