Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AC068867.1-201ENST00000559855 150 ntBASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 PPP1R2P4-201ENST00000424051 595 ntBASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 KRT18P15-201ENST00000458108 1291 ntBASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 AC084752.1-201ENST00000509766 622 ntBASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 KRT8P2-201ENST00000556193 944 ntBASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.3■□□□□ 0.2
CTDP1Q9Y5B0 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 KRT8P18-201ENST00000413425 1445 ntBASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 AC114501.1-201ENST00000445949 172 ntBASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 AC007952.4-201ENST00000573866 637 ntBASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 AC005041.3-201ENST00000606287 649 ntBASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms