Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 C18orf15-201ENST00000623680 2534 ntBASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 KF455155.1-201ENST00000604493 303 ntBASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 AC021321.1-201ENST00000607397 1113 ntBASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 AC064850.1-201ENST00000413279 1398 ntBASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.82■□□□□ 0.28
ZC3H4Q9UPT8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 MIR1226-201ENST00000408658 75 ntBASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 MIR1307-201ENST00000408840 149 ntBASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 IGHVII-74-1-201ENST00000517572 241 ntBASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 SNX20-205ENST00000610485 557 ntTSL 5 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 AC041040.2-201ENST00000622926 2899 ntBASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZC3H4Q9UPT8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms