Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.99□□□□□ -0.33
LRFN1Q9P244 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRFN1Q9P244 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.99□□□□□ -0.33
LRFN1Q9P244 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LRFN1Q9P244 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 PYY2-201ENST00000315776 282 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 RN7SKP109-201ENST00000410592 316 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 HMGA1P1-201ENST00000415560 1062 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 AC018463.1-201ENST00000456674 917 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 KRT18P15-201ENST00000458108 1291 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 GOLGA2P8-201ENST00000505201 779 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 RNA5SP417-201ENST00000516459 108 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 MIR4649-201ENST00000582839 64 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 MIR4750-201ENST00000584564 56 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 AP001065.2-201ENST00000617205 644 ntBASIC12.98□□□□□ -0.33
LRFN1Q9P244 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.98□□□□□ -0.33
LRFN1Q9P244 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRFN1Q9P244 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.97□□□□□ -0.33
LRFN1Q9P244 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRFN1Q9P244 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.97□□□□□ -0.33
LRFN1Q9P244 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 AC092638.2-201ENST00000441105 947 ntBASIC12.97□□□□□ -0.33
LRFN1Q9P244 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 SLC25A15P3-201ENST00000505530 290 ntBASIC12.97□□□□□ -0.33
LRFN1Q9P244 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.97□□□□□ -0.33
LRFN1Q9P244 AP000911.2-201ENST00000534330 502 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms