Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AC016694.1-201ENST00000434179 700 ntBASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 FTH1P14-201ENST00000482930 551 ntBASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 USP32P1-208ENST00000506594 1164 ntBASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 BTNL10-201ENST00000595971 695 ntBASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 IGHV3-72-202ENST00000621503 303 ntBASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AC138951.2-201ENST00000623455 1161 ntBASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN4Q9NQP4 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PFDN4Q9NQP4 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 AL035633.1-201ENST00000406139 838 ntBASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 FAM197Y7-201ENST00000432892 766 ntBASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 COX20P2-201ENST00000452636 358 ntBASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 OR10B1P-201ENST00000601666 907 ntBASIC14.02□□□□□ -0.17
PFDN4Q9NQP4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms