Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
UPF3BQ9BZI7 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
UPF3BQ9BZI7 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
UPF3BQ9BZI7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 MIR1247-201ENST00000408206 136 ntBASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 BNIP3P13-201ENST00000599968 566 ntBASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPF3BQ9BZI7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 AC018735.1-201ENST00000437208 1502 ntBASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 MIR663B-201ENST00000408361 115 ntBASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 SHMT1P1-201ENST00000419974 1312 ntBASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPF3BQ9BZI7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 LINC01815-202ENST00000641468 1409 ntBASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.87■□□□□ 0.29
UPF3BQ9BZI7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms