Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 HSPA7-201ENST00000445535 1927 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 HINT2P1-201ENST00000419438 481 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AL512306.1-201ENST00000432698 848 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 NDUFS6P1-201ENST00000485187 316 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ORAOV1P1-201ENST00000503108 395 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 RN7SL455P-201ENST00000580629 282 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 MIR4522-201ENST00000584932 87 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 BAP1-211ENST00000615113 489 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 AC006372.4-201ENST00000624122 1543 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 STRCP1-201ENST00000509801 5328 ntBASIC10.94□□□□□ -0.66
UBE2E2Q96LR5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AL512430.1-201ENST00000392575 860 ntBASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 ERP29P1-201ENST00000442902 706 ntBASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 FGFR3P1-201ENST00000449999 601 ntBASIC10.93□□□□□ -0.66
UBE2E2Q96LR5 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms