Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MIR7845-201ENST00000618396 99 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 AC025262.2-201ENST00000623975 1056 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AC117489.1-201ENST00000625169 3217 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 RPL7P35-201ENST00000446943 740 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AC079112.1-201ENST00000454972 939 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 KRT8P24-201ENST00000560290 1559 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 NUDT4P2-201ENST00000578341 546 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AC138761.6-201ENST00000583997 1423 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 AP005264.5-201ENST00000590066 467 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 U62317.3-201ENST00000608319 855 ntBASIC15.13■□□□□ 0.01
BEST2Q8NFU1 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BEST2Q8NFU1 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 AC135983.4-201ENST00000564116 1262 ntBASIC15.12■□□□□ 0.01
BEST2Q8NFU1 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms