Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 AL445209.1-201ENST00000607269 3491 ntBASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 AC244394.1-201ENST00000435000 1665 ntBASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 AL157407.1-201ENST00000435784 904 ntBASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 PTPRVP-205ENST00000641549 5067 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 GOLGA8EP-201ENST00000530246 1959 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 RPL7P3-201ENST00000441388 714 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 HNRNPA1P48-202ENST00000565308 961 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 GOLGA8IP-202ENST00000611635 2100 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 REXO1L6P-201ENST00000603433 1515 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms