Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTC1Q2NKJ3 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.07■□□□□ 0
CTC1Q2NKJ3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CTC1Q2NKJ3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PPP1R2P4-201ENST00000424051 595 ntBASIC15.06■□□□□ 0
CTC1Q2NKJ3 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AL451000.1-201ENST00000451300 1186 ntBASIC15.06■□□□□ 0
CTC1Q2NKJ3 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC008026.2-201ENST00000495438 348 ntBASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC013553.1-201ENST00000560906 267 ntBASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC008972.2-201ENST00000606587 494 ntBASIC15.06■□□□□ 0
CTC1Q2NKJ3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC15.06■□□□□ 0
CTC1Q2NKJ3 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 PPT1-213ENST00000641319 2388 ntBASIC15.06■□□□□ 0
CTC1Q2NKJ3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.06■□□□□ 0
CTC1Q2NKJ3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CTC1Q2NKJ3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
CTC1Q2NKJ3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CTC1Q2NKJ3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CTC1Q2NKJ3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.05■□□□□ 0
CTC1Q2NKJ3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.05■□□□□ 0
CTC1Q2NKJ3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CTC1Q2NKJ3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 BRI3P1-201ENST00000440440 378 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 AC006529.1-201ENST00000459978 637 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 ALG1L3P-201ENST00000503331 765 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 AC092862.1-201ENST00000541534 533 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 AC140658.4-201ENST00000561990 352 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 TRMT112P3-201ENST00000580149 358 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms