Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 AC245140.2-201ENST00000624054 1939 ntBASIC12.57□□□□□ -0.4
EFNB1P98172 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
EFNB1P98172 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
EFNB1P98172 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.57□□□□□ -0.4
EFNB1P98172 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 TMEM14DP-201ENST00000422205 345 ntBASIC12.57□□□□□ -0.4
EFNB1P98172 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.57□□□□□ -0.4
EFNB1P98172 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.57□□□□□ -0.4
EFNB1P98172 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.57□□□□□ -0.4
EFNB1P98172 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.57□□□□□ -0.4
EFNB1P98172 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 AC005324.6-201ENST00000587972 613 ntBASIC12.57□□□□□ -0.4
EFNB1P98172 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.57□□□□□ -0.4
EFNB1P98172 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
EFNB1P98172 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
EFNB1P98172 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.57□□□□□ -0.4
EFNB1P98172 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
EFNB1P98172 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB1P98172 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB1P98172 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 AL354877.1-201ENST00000424412 413 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB1P98172 HLA-V-201ENST00000429037 534 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 VDAC1P1-201ENST00000439229 848 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 EIF4HP1-201ENST00000453115 687 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB1P98172 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB1P98172 TERF1P3-201ENST00000505638 1227 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 MIR4745-201ENST00000577608 62 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms