Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RN7SL181P-201ENST00000462921 277 ntBASIC14.83□□□□□ -0.04
IRX4P78413 RPL18P13-201ENST00000478088 569 ntBASIC14.83□□□□□ -0.04
IRX4P78413 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.83□□□□□ -0.04
IRX4P78413 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.83□□□□□ -0.04
IRX4P78413 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.83□□□□□ -0.04
IRX4P78413 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.83□□□□□ -0.04
IRX4P78413 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 NPM1P43-201ENST00000558669 786 ntBASIC14.83□□□□□ -0.04
IRX4P78413 AC242376.1-201ENST00000559033 726 ntBASIC14.83□□□□□ -0.04
IRX4P78413 AC135983.4-201ENST00000564116 1262 ntBASIC14.83□□□□□ -0.04
IRX4P78413 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 SNORD3B-2-202ENST00000571722 791 ntBASIC14.83□□□□□ -0.04
IRX4P78413 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.83□□□□□ -0.04
IRX4P78413 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.83□□□□□ -0.04
IRX4P78413 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.83□□□□□ -0.04
IRX4P78413 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.83□□□□□ -0.04
IRX4P78413 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.83□□□□□ -0.04
IRX4P78413 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 INE2-201ENST00000630399 1874 ntBASIC14.82□□□□□ -0.04
IRX4P78413 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
IRX4P78413 AC005562.1-201ENST00000583030 3219 ntBASIC14.82□□□□□ -0.04
IRX4P78413 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.82□□□□□ -0.04
IRX4P78413 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.82□□□□□ -0.04
IRX4P78413 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.82□□□□□ -0.04
IRX4P78413 AC090857.1-201ENST00000527400 390 ntBASIC14.82□□□□□ -0.04
IRX4P78413 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.82□□□□□ -0.04
IRX4P78413 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.82□□□□□ -0.04
IRX4P78413 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 AC009955.4-201ENST00000597192 544 ntBASIC14.82□□□□□ -0.04
IRX4P78413 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.82□□□□□ -0.04
IRX4P78413 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
IRX4P78413 NAP1L6-202ENST00000641404 1222 ntBASIC14.82□□□□□ -0.04
IRX4P78413 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
IRX4P78413 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 AP000593.2-201ENST00000542775 1433 ntBASIC14.82□□□□□ -0.04
IRX4P78413 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IRX4P78413 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
IRX4P78413 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.82□□□□□ -0.04
IRX4P78413 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.81□□□□□ -0.04
IRX4P78413 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.81□□□□□ -0.04
IRX4P78413 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IRX4P78413 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.81□□□□□ -0.04
IRX4P78413 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms