Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
SUMO3P55854 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SUMO3P55854 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.74□□□□□ -0.37
SUMO3P55854 AL807761.2-201ENST00000422849 729 ntBASIC12.74□□□□□ -0.37
SUMO3P55854 AC007279.1-201ENST00000448547 837 ntBASIC12.74□□□□□ -0.37
SUMO3P55854 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.74□□□□□ -0.37
SUMO3P55854 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.74□□□□□ -0.37
SUMO3P55854 FTH1P22-201ENST00000456305 520 ntBASIC12.74□□□□□ -0.37
SUMO3P55854 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SUMO3P55854 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.74□□□□□ -0.37
SUMO3P55854 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SUMO3P55854 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.74□□□□□ -0.37
SUMO3P55854 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SUMO3P55854 AL356740.1-201ENST00000602192 1297 ntBASIC12.74□□□□□ -0.37
SUMO3P55854 AC012044.1-201ENST00000603431 297 ntBASIC12.74□□□□□ -0.37
SUMO3P55854 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.74□□□□□ -0.37
SUMO3P55854 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.74□□□□□ -0.37
SUMO3P55854 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SUMO3P55854 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SUMO3P55854 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SUMO3P55854 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.74□□□□□ -0.37
SUMO3P55854 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SUMO3P55854 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.74□□□□□ -0.37
SUMO3P55854 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.74□□□□□ -0.37
SUMO3P55854 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SUMO3P55854 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 AC130686.1-201ENST00000622936 2466 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 FAM90A12P-201ENST00000519497 2375 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 FAM90A24P-201ENST00000520792 2369 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
SUMO3P55854 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SUMO3P55854 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.73□□□□□ -0.37
SUMO3P55854 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 OR2K2-202ENST00000374428 1038 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.73□□□□□ -0.37
SUMO3P55854 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 SLC25A24P2-201ENST00000415059 510 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 AL592076.1-201ENST00000424448 303 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.73□□□□□ -0.37
SUMO3P55854 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.73□□□□□ -0.37
SUMO3P55854 RN7SL788P-201ENST00000460504 316 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SUMO3P55854 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 RN7SL720P-201ENST00000488178 304 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
SUMO3P55854 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.73□□□□□ -0.37
SUMO3P55854 KLF17P1-201ENST00000547105 1126 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.73□□□□□ -0.37
SUMO3P55854 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SUMO3P55854 SIGLEC18P-201ENST00000602271 909 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 AF254983.2-201ENST00000612331 135 ntBASIC12.73□□□□□ -0.37
SUMO3P55854 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SUMO3P55854 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.73□□□□□ -0.37
SUMO3P55854 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.73□□□□□ -0.37
SUMO3P55854 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.73□□□□□ -0.37
SUMO3P55854 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SUMO3P55854 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 AC020917.4-201ENST00000623994 1999 ntBASIC12.72□□□□□ -0.37
SUMO3P55854 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.72□□□□□ -0.37
SUMO3P55854 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SUMO3P55854 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.72□□□□□ -0.37
SUMO3P55854 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.72□□□□□ -0.37
SUMO3P55854 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 AC010327.5-201ENST00000586923 3061 ntBASIC12.72□□□□□ -0.37
SUMO3P55854 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SUMO3P55854 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms