Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CICP16-201ENST00000502609 2813 ntBASIC20.39■□□□□ 0.85
KDM5CP41229 AC040160.2-201ENST00000623816 1675 ntBASIC20.39■□□□□ 0.85
KDM5CP41229 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC20.39■□□□□ 0.85
KDM5CP41229 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 AP000437.1-201ENST00000624057 2085 ntBASIC20.39■□□□□ 0.85
KDM5CP41229 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC20.39■□□□□ 0.85
KDM5CP41229 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC20.39■□□□□ 0.85
KDM5CP41229 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
KDM5CP41229 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
KDM5CP41229 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM5CP41229 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC20.39■□□□□ 0.85
KDM5CP41229 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 AC105443.1-201ENST00000433754 712 ntBASIC20.38■□□□□ 0.85
KDM5CP41229 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC20.38■□□□□ 0.85
KDM5CP41229 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 AC008021.1-201ENST00000474180 414 ntBASIC20.38■□□□□ 0.85
KDM5CP41229 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC20.38■□□□□ 0.85
KDM5CP41229 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 HNRNPA1P3-201ENST00000440968 551 ntBASIC20.38■□□□□ 0.85
KDM5CP41229 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 DDX11L8-201ENST00000535849 366 ntBASIC20.38■□□□□ 0.85
KDM5CP41229 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC20.38■□□□□ 0.85
KDM5CP41229 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC20.38■□□□□ 0.85
KDM5CP41229 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC20.38■□□□□ 0.85
KDM5CP41229 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC20.38■□□□□ 0.85
KDM5CP41229 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC20.38■□□□□ 0.85
KDM5CP41229 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KDM5CP41229 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM5CP41229 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KDM5CP41229 AC012358.2-201ENST00000430010 1434 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC20.37■□□□□ 0.85
KDM5CP41229 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KDM5CP41229 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 AC016397.2-201ENST00000624848 1985 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC20.37■□□□□ 0.85
KDM5CP41229 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KDM5CP41229 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
KDM5CP41229 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KDM5CP41229 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.37■□□□□ 0.85
KDM5CP41229 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC20.37■□□□□ 0.85
KDM5CP41229 RN7SL33P-201ENST00000462543 342 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 RPL3P9-201ENST00000463217 1183 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 AC104115.1-201ENST00000484005 623 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 RN7SL47P-201ENST00000488710 299 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 AL450346.2-201ENST00000495602 1024 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC20.37■□□□□ 0.85
KDM5CP41229 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC20.37■□□□□ 0.85
KDM5CP41229 AC136475.7-201ENST00000602949 592 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 AC134878.2-201ENST00000620700 1265 ntBASIC20.37■□□□□ 0.85
KDM5CP41229 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KDM5CP41229 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC20.37■□□□□ 0.85
KDM5CP41229 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KDM5CP41229 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM5CP41229 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms