Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL139099.5-201ENST00000635274 300 ntBASIC14.94□□□□□ -0.02
CHRNA3P32297 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHRNA3P32297 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHRNA3P32297 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA3P32297 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRNA3P32297 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA3P32297 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 AC244394.1-201ENST00000435000 1665 ntBASIC14.93□□□□□ -0.02
CHRNA3P32297 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRNA3P32297 AC004899.1-201ENST00000424687 1714 ntBASIC14.93□□□□□ -0.02
CHRNA3P32297 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 DPM3-202ENST00000368399 517 ntBASIC14.93□□□□□ -0.02
CHRNA3P32297 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CHRNA3P32297 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 BCYRN1-201ENST00000418539 200 ntBASIC14.93□□□□□ -0.02
CHRNA3P32297 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.93□□□□□ -0.02
CHRNA3P32297 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNA3P32297 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNA3P32297 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNA3P32297 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNA3P32297 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 RN7SL163P-201ENST00000583100 276 ntBASIC14.93□□□□□ -0.02
CHRNA3P32297 AC005324.6-201ENST00000587972 613 ntBASIC14.93□□□□□ -0.02
CHRNA3P32297 AC004923.1-202ENST00000642106 209 ntBASIC14.93□□□□□ -0.02
CHRNA3P32297 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA3P32297 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA3P32297 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHRNA3P32297 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 BEND3P3-201ENST00000611030 2440 ntBASIC14.92□□□□□ -0.02
CHRNA3P32297 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHRNA3P32297 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 AC106794.1-201ENST00000506935 792 ntBASIC14.92□□□□□ -0.02
CHRNA3P32297 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms