Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.94□□□□□ -0.5
COL8A2P25067 AC138701.2-201ENST00000553634 226 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 NPM1P43-201ENST00000558669 786 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 RN7SL665P-201ENST00000578793 300 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 NAT9-224ENST00000583757 583 ntTSL 3 BASIC11.94□□□□□ -0.5
COL8A2P25067 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 AC025262.2-201ENST00000623975 1056 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
COL8A2P25067 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 AL365209.1-201ENST00000624418 6473 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 CICP8-201ENST00000455800 2813 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 RPL13AP3-202ENST00000494676 1473 ntBASIC11.94□□□□□ -0.5
COL8A2P25067 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.94□□□□□ -0.5
COL8A2P25067 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
COL8A2P25067 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.94□□□□□ -0.5
COL8A2P25067 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
COL8A2P25067 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 AC103592.1-201ENST00000394513 664 ntBASIC11.93□□□□□ -0.5
COL8A2P25067 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC11.93□□□□□ -0.5
COL8A2P25067 HMGA1P1-201ENST00000415560 1062 ntBASIC11.93□□□□□ -0.5
COL8A2P25067 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC11.93□□□□□ -0.5
COL8A2P25067 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.93□□□□□ -0.5
COL8A2P25067 KRT18P15-201ENST00000458108 1291 ntBASIC11.93□□□□□ -0.5
COL8A2P25067 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 CHCHD2P2-201ENST00000503744 321 ntBASIC11.93□□□□□ -0.5
COL8A2P25067 AC095040.1-201ENST00000513286 675 ntBASIC11.93□□□□□ -0.5
COL8A2P25067 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC11.93□□□□□ -0.5
COL8A2P25067 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
COL8A2P25067 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC11.93□□□□□ -0.5
COL8A2P25067 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 AC107464.3-201ENST00000609172 737 ntBASIC11.93□□□□□ -0.5
COL8A2P25067 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC11.93□□□□□ -0.5
COL8A2P25067 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
COL8A2P25067 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms