Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.51□□□□□ -0.09
ERCC2P18074 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.51□□□□□ -0.09
ERCC2P18074 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.51□□□□□ -0.09
ERCC2P18074 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC2P18074 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.51□□□□□ -0.09
ERCC2P18074 NDUFB10P1-201ENST00000567319 521 ntBASIC14.51□□□□□ -0.09
ERCC2P18074 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.51□□□□□ -0.09
ERCC2P18074 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.51□□□□□ -0.09
ERCC2P18074 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ERCC2P18074 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC2P18074 AP001505.2-201ENST00000616815 443 ntBASIC14.51□□□□□ -0.09
ERCC2P18074 AC079336.7-201ENST00000623428 1078 ntBASIC14.51□□□□□ -0.09
ERCC2P18074 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.51□□□□□ -0.09
ERCC2P18074 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ERCC2P18074 SALL4P6-201ENST00000429385 1691 ntBASIC14.51□□□□□ -0.09
ERCC2P18074 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC2P18074 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC2P18074 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.51□□□□□ -0.09
ERCC2P18074 AC005014.1-201ENST00000432006 2976 ntBASIC14.51□□□□□ -0.09
ERCC2P18074 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ERCC2P18074 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ERCC2P18074 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC2P18074 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ERCC2P18074 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ERCC2P18074 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.5□□□□□ -0.09
ERCC2P18074 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ERCC2P18074 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 AC105206.1-202ENST00000314927 2368 ntBASIC14.5□□□□□ -0.09
ERCC2P18074 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.5□□□□□ -0.09
ERCC2P18074 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.5□□□□□ -0.09
ERCC2P18074 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 AC026320.2-201ENST00000434379 478 ntBASIC14.5□□□□□ -0.09
ERCC2P18074 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.5□□□□□ -0.09
ERCC2P18074 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ERCC2P18074 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 SLC25A15P3-201ENST00000505530 290 ntBASIC14.5□□□□□ -0.09
ERCC2P18074 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.5□□□□□ -0.09
ERCC2P18074 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 AC026803.1-201ENST00000569130 274 ntBASIC14.5□□□□□ -0.09
ERCC2P18074 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.5□□□□□ -0.09
ERCC2P18074 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.5□□□□□ -0.09
ERCC2P18074 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.5□□□□□ -0.09
ERCC2P18074 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ERCC2P18074 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.5□□□□□ -0.09
ERCC2P18074 AC073548.1-201ENST00000624088 1882 ntBASIC14.5□□□□□ -0.09
ERCC2P18074 AL591122.2-201ENST00000624125 1853 ntBASIC14.5□□□□□ -0.09
ERCC2P18074 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 KRT8P43-201ENST00000406052 1458 ntBASIC14.5□□□□□ -0.09
ERCC2P18074 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ERCC2P18074 KRT8P31-201ENST00000504812 1408 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 AC131212.3-201ENST00000624087 4219 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ERCC2P18074 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 KRT18P9-201ENST00000604826 1300 ntBASIC14.49□□□□□ -0.09
ERCC2P18074 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC2P18074 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ERCC2P18074 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ERCC2P18074 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms