Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 AC089987.2-201ENST00000328207 936 ntBASIC14.06□□□□□ -0.16
VCANP13611 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC14.06□□□□□ -0.16
VCANP13611 AC105443.1-201ENST00000433754 712 ntBASIC14.06□□□□□ -0.16
VCANP13611 AC104333.3-201ENST00000449334 479 ntBASIC14.06□□□□□ -0.16
VCANP13611 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.06□□□□□ -0.16
VCANP13611 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC14.06□□□□□ -0.16
VCANP13611 MTHFR-210ENST00000641407 2387 ntBASIC14.06□□□□□ -0.16
VCANP13611 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VCANP13611 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VCANP13611 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC14.06□□□□□ -0.16
VCANP13611 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC14.06□□□□□ -0.16
VCANP13611 IGHV3-60-201ENST00000521678 354 ntBASIC14.06□□□□□ -0.16
VCANP13611 RN7SL750P-201ENST00000582814 238 ntBASIC14.06□□□□□ -0.16
VCANP13611 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.06□□□□□ -0.16
VCANP13611 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.06□□□□□ -0.16
VCANP13611 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.06□□□□□ -0.16
VCANP13611 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VCANP13611 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.06□□□□□ -0.16
VCANP13611 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VCANP13611 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.06□□□□□ -0.16
VCANP13611 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC14.06□□□□□ -0.16
VCANP13611 AC092535.4-201ENST00000609548 397 ntBASIC14.06□□□□□ -0.16
VCANP13611 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC14.06□□□□□ -0.16
VCANP13611 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
VCANP13611 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VCANP13611 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VCANP13611 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.06□□□□□ -0.16
VCANP13611 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.06□□□□□ -0.16
VCANP13611 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC14.05□□□□□ -0.16
VCANP13611 U62317.4-201ENST00000609758 448 ntBASIC14.05□□□□□ -0.16
VCANP13611 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
VCANP13611 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 Z97653.2-201ENST00000623057 1418 ntBASIC14.05□□□□□ -0.16
VCANP13611 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC14.05□□□□□ -0.16
VCANP13611 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VCANP13611 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC14.05□□□□□ -0.16
VCANP13611 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC14.05□□□□□ -0.16
VCANP13611 RN7SL646P-201ENST00000492969 297 ntBASIC14.05□□□□□ -0.16
VCANP13611 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC14.05□□□□□ -0.16
VCANP13611 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VCANP13611 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.05□□□□□ -0.16
VCANP13611 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VCANP13611 AP001267.2-201ENST00000532619 2086 ntBASIC14.04□□□□□ -0.16
VCANP13611 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VCANP13611 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VCANP13611 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC14.04□□□□□ -0.16
VCANP13611 USP8-219ENST00000625664 1568 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms