Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
APOEP02649 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.84□□□□□ -0.03
APOEP02649 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
APOEP02649 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.84□□□□□ -0.03
APOEP02649 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
APOEP02649 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
APOEP02649 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.84□□□□□ -0.03
APOEP02649 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
APOEP02649 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.84□□□□□ -0.03
APOEP02649 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.84□□□□□ -0.03
APOEP02649 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.84□□□□□ -0.03
APOEP02649 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.84□□□□□ -0.03
APOEP02649 AC008723.1-201ENST00000506922 207 ntBASIC14.84□□□□□ -0.03
APOEP02649 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.84□□□□□ -0.03
APOEP02649 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.84□□□□□ -0.03
APOEP02649 AL021578.1-201ENST00000613646 709 ntBASIC14.84□□□□□ -0.03
APOEP02649 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
APOEP02649 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.84□□□□□ -0.03
APOEP02649 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
APOEP02649 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.84□□□□□ -0.03
APOEP02649 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.84□□□□□ -0.03
APOEP02649 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOEP02649 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.83□□□□□ -0.03
APOEP02649 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APOEP02649 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOEP02649 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APOEP02649 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.83□□□□□ -0.03
APOEP02649 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APOEP02649 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
APOEP02649 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.83□□□□□ -0.04
APOEP02649 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
APOEP02649 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
APOEP02649 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 RPS9P1-201ENST00000419943 583 ntBASIC14.83□□□□□ -0.04
APOEP02649 AC007274.2-201ENST00000421675 662 ntBASIC14.83□□□□□ -0.04
APOEP02649 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.83□□□□□ -0.04
APOEP02649 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.83□□□□□ -0.04
APOEP02649 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.83□□□□□ -0.04
APOEP02649 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 KRT8P1-201ENST00000557533 1207 ntBASIC14.83□□□□□ -0.04
APOEP02649 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.83□□□□□ -0.04
APOEP02649 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.83□□□□□ -0.04
APOEP02649 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
APOEP02649 RN7SL574P-201ENST00000581512 297 ntBASIC14.83□□□□□ -0.04
APOEP02649 AL109837.1-201ENST00000603272 613 ntBASIC14.83□□□□□ -0.04
APOEP02649 MEG3_2.1-201ENST00000611456 105 ntBASIC14.83□□□□□ -0.04
APOEP02649 AL353770.1-201ENST00000614915 403 ntBASIC14.83□□□□□ -0.04
APOEP02649 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
APOEP02649 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.83□□□□□ -0.04
APOEP02649 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.83□□□□□ -0.04
APOEP02649 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.83□□□□□ -0.04
APOEP02649 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.83□□□□□ -0.04
APOEP02649 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOEP02649 AC007952.5-201ENST00000572818 1486 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms