Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AL359881.3-201ENST00000602640 1721 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 CAP2P1-201ENST00000557743 1390 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 C8orf49-201ENST00000525043 1968 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AL591122.2-201ENST00000624125 1853 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AL139158.3-201ENST00000641212 1562 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 BAX-205ENST00000391871 687 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AC073869.2-201ENST00000417338 1026 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 CHCHD2P2-201ENST00000503744 321 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 GOLGA2P8-201ENST00000505201 779 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AC242376.1-201ENST00000559033 726 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 IGHV3OR16-16-201ENST00000563644 343 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 AC026803.1-201ENST00000569130 274 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 AL353770.1-201ENST00000614915 403 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 RCC2P1-201ENST00000452257 1476 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 RPL13AP3-202ENST00000494676 1473 ntBASIC10.92□□□□□ -0.66
TRBV12-3P01733 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.92□□□□□ -0.66
TRBV12-3P01733 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms