Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 AL645937.2-201ENST00000396808 931 ntBASIC10.72□□□□□ -0.69
COLCA2A8K830 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
COLCA2A8K830 AC015922.1-201ENST00000421102 1152 ntBASIC10.72□□□□□ -0.69
COLCA2A8K830 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 GLI3-203ENST00000437480 451 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 LINC00265-3P-201ENST00000447588 903 ntBASIC10.72□□□□□ -0.69
COLCA2A8K830 AC104819.1-201ENST00000504587 486 ntBASIC10.72□□□□□ -0.69
COLCA2A8K830 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.72□□□□□ -0.69
COLCA2A8K830 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.72□□□□□ -0.69
COLCA2A8K830 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.72□□□□□ -0.69
COLCA2A8K830 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.72□□□□□ -0.69
COLCA2A8K830 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
COLCA2A8K830 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 DNAJA4-201ENST00000343789 2961 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 MED24-212ENST00000501516 3037 ntTSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 HADH-210ENST00000626637 1774 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 LINC01913-201ENST00000398796 1810 ntTSL 2 BASIC10.72□□□□□ -0.69
COLCA2A8K830 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC10.72□□□□□ -0.69
COLCA2A8K830 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
COLCA2A8K830 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
COLCA2A8K830 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
COLCA2A8K830 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
COLCA2A8K830 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC10.71□□□□□ -0.69
COLCA2A8K830 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
COLCA2A8K830 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.71□□□□□ -0.69
COLCA2A8K830 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.71□□□□□ -0.69
COLCA2A8K830 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.71□□□□□ -0.69
COLCA2A8K830 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC10.71□□□□□ -0.69
COLCA2A8K830 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.71□□□□□ -0.69
COLCA2A8K830 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
COLCA2A8K830 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
COLCA2A8K830 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.71□□□□□ -0.69
COLCA2A8K830 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.71□□□□□ -0.69
COLCA2A8K830 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC10.71□□□□□ -0.69
COLCA2A8K830 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC10.71□□□□□ -0.69
COLCA2A8K830 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.71□□□□□ -0.69
COLCA2A8K830 FICD-205ENST00000552758 603 ntTSL 2 BASIC10.71□□□□□ -0.69
COLCA2A8K830 AC027237.1-201ENST00000560942 655 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms