Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 DKKL1P1-201ENST00000400550 698 ntBASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 GGNBP1-204ENST00000613113 887 ntBASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 AP001267.2-201ENST00000532619 2086 ntBASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRMT13Q9NUP7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRMT13Q9NUP7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 ALG1L7P-201ENST00000502317 768 ntBASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 AC015656.1-201ENST00000624209 3578 ntBASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.33■□□□□ 0.04
TRMT13Q9NUP7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 MIR8071-1-201ENST00000616769 65 ntBASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 MIR8071-2-201ENST00000616772 65 ntBASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms