Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 DMBT1P1-203ENST00000636837 4628 ntBASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 MIR4259-201ENST00000584466 101 ntBASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AC006453.4-201ENST00000636949 1252 ntBASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AL033527.4-201ENST00000641026 673 ntBASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 REXO1L6P-201ENST00000603433 1515 ntBASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AMBRA1Q9C0C7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 AC102953.2-201ENST00000609755 3026 ntBASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 AC104758.3-203ENST00000562938 2123 ntBASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AMBRA1Q9C0C7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 FAM86MP-201ENST00000340703 885 ntBASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 AC078819.1-201ENST00000547454 765 ntBASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 AC012085.1-201ENST00000548270 765 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms