Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 AC004461.1-201ENST00000412461 403 ntBASIC12.48□□□□□ -0.41
AP3S1Q92572 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.48□□□□□ -0.41
AP3S1Q92572 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 AC114501.2-201ENST00000439631 535 ntBASIC12.48□□□□□ -0.41
AP3S1Q92572 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 KRT18P15-201ENST00000458108 1291 ntBASIC12.48□□□□□ -0.41
AP3S1Q92572 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.48□□□□□ -0.41
AP3S1Q92572 AP001582.1-201ENST00000525856 295 ntBASIC12.48□□□□□ -0.41
AP3S1Q92572 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.48□□□□□ -0.41
AP3S1Q92572 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
AP3S1Q92572 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.47□□□□□ -0.41
AP3S1Q92572 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.47□□□□□ -0.41
AP3S1Q92572 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 IL9RP2-201ENST00000423948 1312 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 AC087499.5-201ENST00000452760 1342 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 AL139400.1-201ENST00000366220 510 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.47□□□□□ -0.41
AP3S1Q92572 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.47□□□□□ -0.41
AP3S1Q92572 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.47□□□□□ -0.41
AP3S1Q92572 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.47□□□□□ -0.41
AP3S1Q92572 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.47□□□□□ -0.41
AP3S1Q92572 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 AC004466.1-201ENST00000599515 1080 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 AC004835.2-201ENST00000603762 682 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 AL662799.1-202ENST00000614205 422 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.47□□□□□ -0.41
AP3S1Q92572 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S1Q92572 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
AP3S1Q92572 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S1Q92572 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms