Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 PXK-210ENST00000479241 2817 ntTSL 2 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NUP35Q8NFH5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC10.58□□□□□ -0.71
NUP35Q8NFH5 AC087499.5-201ENST00000452760 1342 ntBASIC10.58□□□□□ -0.71
NUP35Q8NFH5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
NUP35Q8NFH5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 MICA-210ENST00000616296 2260 ntTSL 5 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NUP35Q8NFH5 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ZNF493-208ENST00000599461 1769 ntBASIC10.57□□□□□ -0.72
NUP35Q8NFH5 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms